BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B03LP1|AL425635
(600 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1665 1029 0.0
>3x_Contig1665
Length = 15710
Score = 1029 bits (509), Expect = 0.0
Identities = 569/595 (95%), Gaps = 4/595 (0%)
Strand = Plus / Plus
Query: 5 caggacatcgtcacgaggaagaaccgg-aattggcaacaacatggtaam-cagaaacaaa 62
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 12414 caggacatcgtcacgaggaagaaccgggaattggcaacaacatggtaacacagaaacaaa 12473
Query: 63 tgggaaacagaatagaaacgatgtttgccattttcgccacggctaatttgttktacgcac 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12474 tgggaaacagaatagaaacgatgtttgccattttcgccacggctaatttgttgtacgcac 12533
Query: 123 atattagggaaaawcgatagacctccaaatctaaagcaataaaaaatattagtgtttrat 182
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 12534 atattagggaaaatcgatagacctccaaatctaaagcaataaaagatattagtgtttgat 12593
Query: 183 atatagatattataratatagttat-cttatgcgttaagatataagtkttggaatggcat 241
|||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 12594 atatagatattatagatatagttatacttatgcgttaagatataagtgttggaatggcat 12653
Query: 242 attttctgtgagtagatggggttgttgttgttgttgttgttgttgttgttgttgagagta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12654 attttctgtgagtagatggggttgttgttgttgttgttgttgttgttgttgttgagagta 12713
Query: 302 aaataataacatgactgtaacgaaaacaaaaaataagttgagcaaaaaarggaaaacatc 361
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12714 aaataataacatgactgtaacgaaaacaaaaaataagttgagcaaaaaagggaaaacatc 12773
Query: 362 attagtkaaaaactgcgaataggaagcgatagataattaaaggaagaatataawtcgaat 421
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12774 attagtgaaaaactgcgaataggaagcgatagataattaaaggaagaatataattcgaat 12833
Query: 422 kagaactggcattwcttakacggaagtgaaaaaaaaacattataatatgawagawtccta 481
||||||||||| ||| ||||| |||||||||||||||||||||| || ||| |||||
Sbjct: 12834 gagaactggcatgtctttgacggaggtgaaaaaaaaacattataataggatagattccta 12893
Query: 482 tgaattgtttgttcctcttgttcaatgcagagtatwttttttcttkgttttattataama 541
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
Sbjct: 12894 tgaattgtttgttcctcttgttcaatgcagagtat-ttttttcttggttttattataaca 12952
Query: 542 aaagcgacaataataatgtgtttgawattcctcttggaacctcatatgttggtgt 596
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12953 aaagcgacaataataatgtgtttgaaattcctcttggaacctcatatgttggtgt 13007
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6816
Number of Sequences: 1807
Number of extensions: 6816
Number of successful extensions: 1102
Number of sequences better than 1.0e-20: 1
length of query: 600
length of database: 10,358,551
effective HSP length: 16
effective length of query: 584
effective length of database: 10,329,639
effective search space: 6032509176
effective search space used: 6032509176
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)